Detail-Interactions: | |
RAID ID: | RRI00003908 |
---|---|
RNA/Protein Symbol 1: | SCARNA5(U87) |
RNA/Protein Category 1: | snoRNA |
RNA/Protein Symbol 2: | RNA28S4 |
RNA/Protein Category 2: | rRNA |
Validated Method: | |
Tissue: | |
PMID: | 16083012 |
Detail description: | New mammalian snoRNA U87 belongs to the C/D family and is involved in ribose methylation of guanylic acid residue (position 3468) in 28S rRNA. A host gene harboring the U87 snoRNA gene in its intron was described for rodents and humans. |
The Predicated Binding Sites between and | |||||
By miRanda | Structure | Match Score | Energy Score | Location | Location |
The Predicated Binding Sites between and | ||||
By RIsearch | Structure | Location | Location | Score |
The Predicated Binding Sites of RNA28S4 | |
RBPBD | |
RsiteDB | |
BindN | |
BindN+ | |
RNAbindR | |
Pprint |
The 'First Node' or 'Second Node' option represents the sub-network of interacting RNA/Protein with the first or second interaction node,
the 'Both the Nodes' option represents the sub-network of interacting RNA/Protein with both of interaction nodes.
The 'First Neighbour' represents the sub-network of direct interacting with the center node,
the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node.
Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.
The Detail page: representing the detail information for RNA-RNA/RNA-Protein interaction;
The Binding page: representing the predicted binding sites and/or constants.
The Network page: representing the interaction sub-network of interacting RNA/Protein.