Detail-Interactions: | |
RAID ID: | RRI00003059 |
---|---|
RNA/Protein Symbol 1: | MIR24-1(miR-24) |
RNA/Protein Category 1: | miRNA |
RNA/Protein Symbol 2: | XIAP mRNA(X-linked inhibitor of apoptosis protein) |
RNA/Protein Category 2: | mRNA |
Validated Method: | Luciferase reporter assay |
Tissue: | |
PMID: | 22733138 |
Detail description: | Using a luciferase construct of the XIAP 3'UTR, we showed that miR-24 specifically coordinates to the XIAP mRNA. |
The Predicated Binding Sites between MIR24-1 and XIAP | |||||
By miRanda | Structure | Match Score | Energy Score | MIR24-1 Location | XIAP Location |
The Predicated Binding Sites between MIR24-1 and XIAP | ||||
By RIsearch | Structure | MIR24-1 Location | XIAP Location | Score |
Query: 3' UGCCUAC-UGAGCUGAUA 5' |:||||| |:||||||:| Target: 5' AUGGAUGUAUUCGACUGU 3' |
1-17 | 1271-1288 | -21.36 | |
The Predicated Binding Sites of XIAP | |
RBPBD | |
RsiteDB | |
BindN | |
BindN+ | |
RNAbindR | |
Pprint |
The 'First Node' or 'Second Node' option represents the sub-network of interacting RNA/Protein with the first or second interaction node,
the 'Both the Nodes' option represents the sub-network of interacting RNA/Protein with both of interaction nodes.
The 'First Neighbour' represents the sub-network of direct interacting with the center node,
the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node.
Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.
The Detail page: representing the detail information for RNA-RNA/RNA-Protein interaction;
The Binding page: representing the predicted binding sites and/or constants.
The Network page: representing the interaction sub-network of interacting RNA/Protein.