Detail-Interactions: | |
RAID ID: | RRI00000224 |
---|---|
RNA/Protein Symbol 1: | RevErbA¦Á |
RNA/Protein Category 1: | lncRNA |
RNA/Protein Symbol 2: | THRA mRNA(TR¦Á2) |
RNA/Protein Category 2: | mRNA |
Validated Method: | Northern blot, RNase protection assay |
Tissue: | COS-1 cells//293 cells |
PMID: | 10753970 |
Detail description: | "Our results demonstrate that the activity of the TR¦Á2-specific 5¡ä splice site (ss) is dependent on sequence elements located within the TR¦Á2-specific intron. We also find that RevErb expression results in a decrease in TR¦Á2 mRNA relative to TR¦Á1, consistent with a role for RevErb mRNA in blocking TR¦Á2 expression. |
The Predicated Binding Sites between and | |||||
By miRanda | Structure | Match Score | Energy Score | Location | Location |
The Predicated Binding Sites between and | ||||
By RIsearch | Structure | Location | Location | Score |
The Predicated Binding Sites of THRA | |
RBPBD | |
RsiteDB | |
BindN | |
BindN+ | |
RNAbindR | |
Pprint |
The 'First Node' or 'Second Node' option represents the sub-network of interacting RNA/Protein with the first or second interaction node,
the 'Both the Nodes' option represents the sub-network of interacting RNA/Protein with both of interaction nodes.
The 'First Neighbour' represents the sub-network of direct interacting with the center node,
the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node.
Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.
The Detail page: representing the detail information for RNA-RNA/RNA-Protein interaction;
The Binding page: representing the predicted binding sites and/or constants.
The Network page: representing the interaction sub-network of interacting RNA/Protein.