The Detail Information for This Interaction


  • Detail
  • Binding
  • Network
Detail-Interactions:
RAID ID: RRI00000101
RNA/Protein Symbol 1:DIO3OS(Dio3os)
RNA/Protein Category 1: lncRNA
RNA/Protein Symbol 2: DIO3 mRNA(Dio3)
RNA/Protein Category 2: mRNA
Validated Method: RT-PCR
Tissue:  
PMID: 14962667 
Detail description:

We analyzed the human DIO3 genomic region and identified a gene (DIO3OS) that is transcribed in the antisense orientation. Exonic sequence of a Dio3os cDNA overlaps with the Dio3 promoter and strong promoter activity in the antisense orientation is detected in a genomic fragment located 3` of mouse and human DIO3 but not in the DIO3 promoter region. 

The Predicated Binding Sites between DIO3OS and DIO3
By miRanda Structure Match Score Energy Score DIO3OS Location DIO3 Location
The Predicated Binding Sites between DIO3OS and DIO3
By RIsearch Structure DIO3OS Location DIO3 Location Score 
Query:    3' GAAACUGAUC---UCAUCCCUCAGGGCUUGGCACAACUGCCC 5'
          ||  |:|      |||:||  ||| ||  ||| ||| |||||
Target:   5' CUCGGGCCUCCCUAGUGGGUCGUCGCG--CCG-GUU-ACGGG 3'
3085-3123 16-53 -26.87
The Predicated Binding Sites of DIO3
RBPBD 

					

					

						RsiteDB
						
					

						BindN
						
							 

								
					

					

						BindN+
						
							 

								
					

					

					    RNAbindR
						
                              
	 
								
					

					

					    Pprint
						
                            

								
					



				 
	
            			
	

	
    
	
	  
	 

      

	  
Visualization:
	  
	  

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	  The 'First Node' or 'Second Node' option represents the sub-network of interacting RNA/Protein with the first or second interaction node,
	  the 'Both the Nodes' option represents the sub-network of interacting RNA/Protein with both of interaction nodes. 
	  
The 'First Neighbour' represents the sub-network of direct interacting with the center node, 
	  the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node. 
	  Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.
	 


	  

	   
	
	

  





	

		

           			
				
	
                   The Detail page: representing the detail information for RNA-RNA/RNA-Protein interaction;
 
				   The Binding page: representing the predicted binding sites and/or constants.
 
				   The Network page: representing the interaction sub-network of interacting RNA/Protein.