Detail-Interactions: | |
RAID ID: | RRI00000072 |
---|---|
RNA/Protein Symbol 1: | GNAS-AS1(Nespas) |
RNA/Protein Category 1: | lncRNA |
RNA/Protein Symbol 2: | GNAS mRNA(Nesp) |
RNA/Protein Category 2: | mRNA |
Validated Method: | Northern blot |
Tissue: | |
PMID: | 10716699 |
Detail description: | The Nespas transcript therefore either may be less stable or only weakly expressed but, even so, still able to regulate the silencing of the sense Nesp transcript from the paternal allele. |
The Predicated Binding Sites between GNAS-AS1 and GNAS | |||||
By miRanda | Structure | Match Score | Energy Score | GNAS-AS1 Location | GNAS Location |
The Predicated Binding Sites between GNAS-AS1 and GNAS | ||||
By RIsearch | Structure | GNAS-AS1 Location | GNAS Location | Score |
Query: 3' GGCCC---GGCAGGCC---CUCCCAGAUGCACCCU---GUC 5' |:|| ||| || ||||| :|| |||| |:| Target: 5' CUGGCUCCCCGCGCGCGUCGAGGG---GCG-GGGAGCUCGG 3' |
1125-1156 | 118-154 | -25.37 | |
The Predicated Binding Sites of GNAS | |
RBPBD | |
RsiteDB | |
BindN | |
BindN+ | |
RNAbindR | |
Pprint |
The 'First Node' or 'Second Node' option represents the sub-network of interacting RNA/Protein with the first or second interaction node,
the 'Both the Nodes' option represents the sub-network of interacting RNA/Protein with both of interaction nodes.
The 'First Neighbour' represents the sub-network of direct interacting with the center node,
the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node.
Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.
The Detail page: representing the detail information for RNA-RNA/RNA-Protein interaction;
The Binding page: representing the predicted binding sites and/or constants.
The Network page: representing the interaction sub-network of interacting RNA/Protein.