The Detail Information for This Interaction


  • Detail
  • Binding
  • Network
Detail-Interactions:
RAID ID: RRI00000068
RNA/Protein Symbol 1:NUDT6(gfg)
RNA/Protein Category 1: lncRNA
RNA/Protein Symbol 2: FGF7 mRNA
RNA/Protein Category 2: mRNA
Validated Method: RT-PCR
Tissue: Heart tissue//liver tissue//skeletal muscle tissue//testis tissue 
PMID: 7999082 
Detail description:

In amphibian oocytes bFGF mRNA is regulated post-transcriptionally by interaction with an antisense RNA transcript.These findings suggest a role for gfg in regulation of bFGF expression. 

The Predicated Binding Sites between NUDT6 and FGF7
By miRanda Structure Match Score Energy Score NUDT6 Location FGF7 Location
The Predicated Binding Sites between NUDT6 and FGF7
By RIsearch Structure NUDT6 Location FGF7 Location Score 
Query:    3' AGC----CUCUUUUCGAAUAAAGCAAAUGCGUGAAAAAGAAA 5'
          |||    |:||||:|:     ||||   ||:|     |||||
Target:   5' UCGUUAUGGGAAAGGUGA-ACUCGU---CGUAA----UCUUU 3'
1134-1171 1750-1783 -17.83
The Predicated Binding Sites of FGF7
RBPBD 

					

					

						RsiteDB
						
					

						BindN
						
							 

								
					

					

						BindN+
						
							 

								
					

					

					    RNAbindR
						
                              
	 
								
					

					

					    Pprint
						
                            

								
					



				 
	
            			
	

	
    
	
	  
	 

      

	  
Visualization:
	  
	  

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	  The 'First Node' or 'Second Node' option represents the sub-network of interacting RNA/Protein with the first or second interaction node,
	  the 'Both the Nodes' option represents the sub-network of interacting RNA/Protein with both of interaction nodes. 
	  
The 'First Neighbour' represents the sub-network of direct interacting with the center node, 
	  the 'Second Neighbour' represents the sub-network of direct or second step interacting with the center node. 
	  Interaction sub-network based on the two nodes of this interaction may help the researchers represents all interacting partners immediately.
	 


	  

	   
	
	

  





	

		

           			
				
	
                   The Detail page: representing the detail information for RNA-RNA/RNA-Protein interaction;
 
				   The Binding page: representing the predicted binding sites and/or constants.
 
				   The Network page: representing the interaction sub-network of interacting RNA/Protein.