ncRNADetailInformation

Detail Information
Functional analysis

miRNA name

pre-miRNA

family

pre-miRNA Sequence

mature-miRNA

mature sequence

pre-miRNA description

miR-33a

MI0000091	MIPF0000070	CUGUGGUGCAUUGUAGUUGCAUUGCAUGUUCUGGUGGUACCCAUGCAAUGUUUCCACAGUGCAUCACAG	MIMAT0000091 hsa-miR-33a-5p	GUGCAUUGUAGUUGCAUUGCA	The mature sequence shown here represents the most commonly cloned formfrom large-scale cloning studies .
MI0000091	MIPF0000070	CUGUGGUGCAUUGUAGUUGCAUUGCAUGUUCUGGUGGUACCCAUGCAAUGUUUCCACAGUGCAUCACAG	MIMAT0004506 hsa-miR-33a-3p	CAAUGUUUCCACAGUGCAUCAC	The mature sequence shown here represents the most commonly cloned formfrom large-scale cloning studies .

link to database

TargetScanS 6.2 | MicroCosm | microRNA.org | miRNAMap 2.0

Interacted genes from RAID,miRTarBase

TGOLN2,LIMA1,LDHA,PIM3,FBXO30,YWHAH,HOXA9,PIM1,GLE1,PCM1,PPP1R9A,TMEM65,STYX,CROT,BMI1
more » TGOLN2,LIMA1,LDHA,PIM3,FBXO30,YWHAH,HOXA9,PIM1,GLE1,PCM1,PPP1R9A,TMEM65,STYX,CROT,BMI1,SAMD8,LRRC8A,GPR137C,KCNK1,AKAP11,ABCA1,RAP2C,PTHLH,NCOA3,MAPK8,RNF19A,STRBP,ICT1,ZNF217,RAB5A,DCBLD2,C19orf43,CMIP,ERBB2IP,ABCB11,CRY2,ZFYVE20,RPRD1B,SLC39A14,TRIM23,DSC3,MLX,SH3PXD2A,IER5,FOXP1,BCL10,GXYLT1,HIF1A,CEBPG,PAPOLG,BRWD1,CSNK1G3,NR2C2AP,ERO1LB,RPS23,GTF2H3,BTBD2,IRS2,SGMS1,HMGB2,NUFIP2,TSG101,ANKRD29,CNIH,KLF9,BSDC1,RUNDC3B,ZC3H12C,SERTAD2,NCOA6,SHCBP1,NPC1,RTN4,SRC,PCGF2,NFYC,VTI1B,TIA1,RHBDD1,EXOC4,TWIST1

KEGG pathways enriched for interacted genes

pathway name

pathway description

target genes enrich in pathway

p-value

hsa04144	Endocytosis	ZFYVE20,SRC,RAB5A,TSG101,	4.84E-1

Gene ontology terms enriched for interacted genes

GO terms

GO terms description

target genes enrich in GO term

p-value

GO:0031328	positive regulation of cellular biosynthetic process	SERTAD2,NFYC,HMGB2,CEBPG,NCOA6,PTHLH,ABCA1,BCL10,HIF1A,YWHAH,IRS2,NCOA3,	2.86E-4
GO:0009891	positive regulation of biosynthetic process	SERTAD2,NFYC,HMGB2,CEBPG,NCOA6,PTHLH,ABCA1,BCL10,HIF1A,YWHAH,IRS2,NCOA3,	3.24E-4
GO:0030522	intracellular receptor-mediated signaling pathway	DCBLD2,KLF9,NCOA6,YWHAH,NCOA3,	4.05E-4
GO:0007242	intracellular signaling cascade	KLF9,RAP2C,SRC,MAPK8,AKAP11,HMGB2,PTHLH,NCOA6,ABCA1,TRIM23,NCOA3,DCBLD2,BCL10,YWHAH,CNIH,RAB5A,	5.13E-4
GO:0045935	positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	SERTAD2,NFYC,HMGB2,CEBPG,NCOA6,PTHLH,ABCA1,BCL10,HIF1A,YWHAH,NCOA3,	5.67E-4

GO:0051173	positive regulation of nitrogen compound metabolic process	SERTAD2,NFYC,HMGB2,CEBPG,NCOA6,PTHLH,ABCA1,BCL10,HIF1A,YWHAH,NCOA3,	7.25E-4
GO:0045449	regulation of transcription	KLF9,TWIST1,PCGF2,HOXA9,HMGB2,NCOA6,PTHLH,BMI1,CRY2,HIF1A,ZNF217,FOXP1,NCOA3,MLX,PIM1,SERTAD2,NFYC,BRWD1,CEBPG,MIER3,BCL10,YWHAH,TSG101,GTF2H3,	9.79E-4
GO:0051090	regulation of transcription factor activity	PIM1,CEBPG,PTHLH,BCL10,NCOA3,	1.33E-2
GO:0051101	regulation of DNA binding	PIM1,CEBPG,PTHLH,BCL10,NCOA3,	2.41E-2
GO:0030518	steroid hormone receptor signaling pathway	KLF9,NCOA6,YWHAH,NCOA3,	2.47E-2
GO:0010557	positive regulation of macromolecule biosynthetic process	SERTAD2,NFYC,HMGB2,CEBPG,NCOA6,BCL10,HIF1A,YWHAH,IRS2,NCOA3,	3.11E-2
GO:0046907	intracellular transport	MLX,GLE1,ZFYVE20,NPC1,ERBB2IP,ABCA1,CRY2,VTI1B,YWHAH,EXOC4,	3.21E-2
GO:0030097	hemopoiesis	LRRC8A,HOXA9,CEBPG,NCOA6,BMI1,FOXP1,	4.78E-2
GO:0051098	regulation of binding	PIM1,CEBPG,PTHLH,BCL10,NCOA3,	5.58E-2
GO:0006350	transcription	KLF9,TWIST1,PCGF2,HOXA9,NCOA6,BMI1,CRY2,HIF1A,ZNF217,FOXP1,NCOA3,MLX,SERTAD2,NFYC,BRWD1,CEBPG,MIER3,PAPOLG,GTF2H3,	6.04E-2
GO:0006355	regulation of transcription, DNA-dependent	KLF9,TWIST1,PCGF2,HOXA9,HMGB2,NCOA6,HIF1A,FOXP1,NCOA3,MLX,SERTAD2,NFYC,BRWD1,CEBPG,BCL10,TSG101,GTF2H3,	6.14E-2
GO:0006357	regulation of transcription from RNA polymerase II promoter	KLF9,TWIST1,PCGF2,BRWD1,NFYC,HMGB2,CEBPG,NCOA6,HIF1A,FOXP1,	6.22E-2
GO:0048534	hemopoietic or lymphoid organ development	LRRC8A,HOXA9,CEBPG,NCOA6,BMI1,FOXP1,	7.16E-2
GO:0051252	regulation of RNA metabolic process	KLF9,TWIST1,PCGF2,HOXA9,HMGB2,NCOA6,HIF1A,FOXP1,NCOA3,MLX,SERTAD2,NFYC,BRWD1,CEBPG,BCL10,TSG101,GTF2H3,	7.61E-2
GO:0015031	protein transport	GLE1,ZFYVE20,ERBB2IP,ABCA1,CRY2,VTI1B,YWHAH,EXOC4,RAB5A,TSG101,	8.37E-2
GO:0032535	regulation of cellular component size	DCBLD2,RTN4,SERTAD2,ERBB2IP,LIMA1,SGMS1,	8.48E-2
GO:0045184	establishment of protein localization	GLE1,ZFYVE20,ERBB2IP,ABCA1,CRY2,VTI1B,YWHAH,EXOC4,RAB5A,TSG101,	8.87E-2
GO:0002520	immune system development	LRRC8A,HOXA9,CEBPG,NCOA6,BMI1,FOXP1,	9.14E-2

KEGG pathways and Gene Ontology terms enriched for the interacted genes of ncRNA from RAID and miRTarBase.

disease name	related genes	p-value