ncRNADetailInformation

Detail Information
Functional analysis

miRNA name

pre-miRNA

family

pre-miRNA Sequence

mature-miRNA

mature sequence

pre-miRNA description

miR-19a

MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0000073 hsa-miR-19a-3p	UGUGCAAAUCUAUGCAAAACUGA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0004490 hsa-miR-19a-5p	AGUUUUGCAUAGUUGCACUACA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0000073 hsa-miR-19a-3p	UGUGCAAAUCUAUGCAAAACUGA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0004490 hsa-miR-19a-5p	AGUUUUGCAUAGUUGCACUACA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0000073 hsa-miR-19a-3p	UGUGCAAAUCUAUGCAAAACUGA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0004490 hsa-miR-19a-5p	AGUUUUGCAUAGUUGCACUACA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0000073 hsa-miR-19a-3p	UGUGCAAAUCUAUGCAAAACUGA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0004490 hsa-miR-19a-5p	AGUUUUGCAUAGUUGCACUACA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0004490 hsa-miR-19a-5p	AGUUUUGCAUAGUUGCACUACA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0000073 hsa-miR-19a-3p	UGUGCAAAUCUAUGCAAAACUGA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0000073 hsa-miR-19a-3p	UGUGCAAAUCUAUGCAAAACUGA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0004490 hsa-miR-19a-5p	AGUUUUGCAUAGUUGCACUACA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0004490 hsa-miR-19a-5p	AGUUUUGCAUAGUUGCACUACA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0000073 hsa-miR-19a-3p	UGUGCAAAUCUAUGCAAAACUGA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0004490 hsa-miR-19a-5p	AGUUUUGCAUAGUUGCACUACA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0000073 hsa-miR-19a-3p	UGUGCAAAUCUAUGCAAAACUGA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0004490 hsa-miR-19a-5p	AGUUUUGCAUAGUUGCACUACA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0000073 hsa-miR-19a-3p	UGUGCAAAUCUAUGCAAAACUGA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0004490 hsa-miR-19a-5p	AGUUUUGCAUAGUUGCACUACA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0000073 hsa-miR-19a-3p	UGUGCAAAUCUAUGCAAAACUGA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .
MI0000073	MIPF0000011	GCAGUCCUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGCCUGC	MIMAT0000073 hsa-miR-19a-3p	UGUGCAAAUCUAUGCAAAACUGA	This sequence maps to chromosome 13 and is named miR-19a precursor-13 inreference .

link to database

TargetScanS 6.2 | MicroCosm | microRNA.org | miRNAMap 2.0

Interacted genes from RAID,miRTarBase

LMOD1,KAT2B,VPS4B,MYCN,PTENP1,ESR1,BMPR2,CUL5,IMPDH1,NPEPL1,MECP2,SOCS1,ATXN1,ABCA1,PRMT5
more » LMOD1,KAT2B,VPS4B,MYCN,PTENP1,ESR1,BMPR2,CUL5,IMPDH1,NPEPL1,MECP2,SOCS1,ATXN1,ABCA1,PRMT5,CCND1,PSAP,TNF,TGFBR2,ARIH2,TLR2,SUZ12,PRRC2C,WDFY3,IL6,MTF2,TMEM87A,WDR96,HOXA5,GRK6,KDELR2,SMAD4,BCL2L11,HIF1A,RPS6KA5,PIK3R3,RAB14,ERBB4,RAB13,MSMO1,NR4A2,PTEN,RNF4

KEGG pathways enriched for interacted genes

pathway name

pathway description

target genes enrich in pathway

p-value

hsa05200	Pathways in cancer	CCND1,PTEN,PIK3R3,HIF1A,PTENP1,SMAD4,TGFBR2,IL6,	2.71E-2
hsa05212	Pancreatic cancer	CCND1,PIK3R3,SMAD4,TGFBR2,	3.93E-2
hsa05220	Chronic myeloid leukemia	CCND1,PIK3R3,SMAD4,TGFBR2,	4.41E-2
hsa05210	Colorectal cancer	CCND1,PIK3R3,SMAD4,TGFBR2,	6.06E-2
hsa04350	TGF-beta signaling pathway	BMPR2,TNF,SMAD4,TGFBR2,	6.68E-2

Gene ontology terms enriched for interacted genes

GO terms

GO terms description

target genes enrich in GO term

p-value

GO:0009719	response to endogenous stimulus	ERBB4,CCND1,PTEN,PIK3R3,KAT2B,NR4A2,TNF,PTENP1,TGFBR2,SOCS1,ESR1,IL6,	4.86E-8
GO:0010033	response to organic substance	ERBB4,CCND1,PTEN,PIK3R3,KAT2B,VPS4B,PTENP1,TNF,ESR1,SOCS1,NR4A2,TGFBR2,TLR2,IL6,	1.28E-7
GO:0009725	response to hormone stimulus	ERBB4,CCND1,PTEN,PIK3R3,KAT2B,TNF,PTENP1,TGFBR2,SOCS1,ESR1,IL6,	2.73E-7
GO:0042127	regulation of cell proliferation	ERBB4,CCND1,BMPR2,PTEN,KAT2B,SUZ12,PTENP1,HIF1A,TNF,CUL5,MYCN,SMAD4,TGFBR2,IL6,	3.32E-7
GO:0048545	response to steroid hormone stimulus	ERBB4,CCND1,PTEN,TNF,PTENP1,TGFBR2,SOCS1,ESR1,IL6,	4.99E-7

GO:0042325	regulation of phosphorylation	CCND1,BMPR2,PTEN,TNF,ATXN1,PTENP1,SMAD4,TGFBR2,SOCS1,IL6,	1.93E-5
GO:0019220	regulation of phosphate metabolic process	CCND1,BMPR2,PTEN,TNF,ATXN1,PTENP1,SMAD4,TGFBR2,SOCS1,IL6,	2.58E-5
GO:0051174	regulation of phosphorus metabolic process	CCND1,BMPR2,PTEN,TNF,ATXN1,PTENP1,SMAD4,TGFBR2,SOCS1,IL6,	2.58E-5
GO:0006357	regulation of transcription from RNA polymerase II promoter	MYCN,MECP2,RNF4,SUZ12,NR4A2,HIF1A,TNF,ATXN1,SMAD4,IL6,	7.10E-5
GO:0008284	positive regulation of cell proliferation	ERBB4,CCND1,MYCN,SUZ12,HIF1A,TNF,TGFBR2,IL6,	7.65E-5
GO:0001932	regulation of protein amino acid phosphorylation	CCND1,BMPR2,TNF,SMAD4,SOCS1,IL6,	7.67E-5
GO:0001934	positive regulation of protein amino acid phosphorylation	CCND1,BMPR2,TNF,SMAD4,IL6,	7.84E-5
GO:0042327	positive regulation of phosphorylation	CCND1,BMPR2,TNF,SMAD4,IL6,	1.09E-4
GO:0010562	positive regulation of phosphorus metabolic process	CCND1,BMPR2,TNF,SMAD4,IL6,	1.23E-4
GO:0045937	positive regulation of phosphate metabolic process	CCND1,BMPR2,TNF,SMAD4,IL6,	1.23E-4
GO:0032722	positive regulation of chemokine production	HIF1A,TNF,IL6,	1.35E-4
GO:0043627	response to estrogen stimulus	CCND1,PTEN,PTENP1,TGFBR2,SOCS1,ESR1,	1.49E-4
GO:0042493	response to drug	ERBB4,CCND1,PTEN,PTENP1,TGFBR2,SOCS1,TLR2,	2.17E-4
GO:0007167	enzyme linked receptor protein signaling pathway	ERBB4,BMPR2,PTEN,PIK3R3,RPS6KA5,PTENP1,SMAD4,TGFBR2,	2.18E-4
GO:0035295	tube development	BMPR2,HOXA5,MYCN,SMAD4,TGFBR2,BCL2L11,	2.37E-4
GO:0010604	positive regulation of macromolecule metabolic process	CCND1,BMPR2,RNF4,NR4A2,HIF1A,TNF,ATXN1,SMAD4,ESR1,IL6,	2.49E-4
GO:0006355	regulation of transcription, DNA-dependent	HOXA5,MECP2,KAT2B,SUZ12,RPS6KA5,HIF1A,ATXN1,TNF,ESR1,MYCN,RNF4,NR4A2,SMAD4,IL6,	2.87E-4
GO:0008285	negative regulation of cell proliferation	PTEN,KAT2B,TNF,PTENP1,SMAD4,CUL5,TGFBR2,IL6,	2.92E-4
GO:0035239	tube morphogenesis	HOXA5,MYCN,SMAD4,TGFBR2,BCL2L11,	3.09E-4
GO:0045944	positive regulation of transcription from RNA polymerase II promoter	RNF4,NR4A2,HIF1A,TNF,ATXN1,SMAD4,IL6,	3.38E-4
GO:0051252	regulation of RNA metabolic process	HOXA5,MECP2,KAT2B,SUZ12,RPS6KA5,HIF1A,ATXN1,TNF,ESR1,MYCN,RNF4,NR4A2,SMAD4,IL6,	3.59E-4
GO:0051240	positive regulation of multicellular organismal process	ERBB4,BMPR2,HIF1A,TNF,TLR2,IL6,	3.82E-4
GO:0010628	positive regulation of gene expression	RNF4,NR4A2,HIF1A,TNF,ATXN1,SMAD4,ESR1,IL6,	6.11E-4
GO:0048754	branching morphogenesis of a tube	HOXA5,MYCN,SMAD4,TGFBR2,	6.20E-4
GO:0032642	regulation of chemokine production	HIF1A,TNF,IL6,	6.68E-4
GO:0051094	positive regulation of developmental process	BMPR2,HIF1A,TNF,SMAD4,TGFBR2,IL6,	6.92E-4
GO:0031399	regulation of protein modification process	CCND1,BMPR2,TNF,SMAD4,SOCS1,IL6,	9.04E-4
GO:0001763	morphogenesis of a branching structure	HOXA5,MYCN,SMAD4,TGFBR2,	9.06E-4
GO:0045935	positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	RNF4,ABCA1,NR4A2,HIF1A,TNF,ATXN1,SMAD4,IL6,	9.33E-4
GO:0032755	positive regulation of interleukin-6 production	TNF,TLR2,IL6,	1.08E-2
GO:0051173	positive regulation of nitrogen compound metabolic process	RNF4,ABCA1,NR4A2,HIF1A,TNF,ATXN1,SMAD4,IL6,	1.12E-2
GO:0045449	regulation of transcription	HOXA5,MECP2,KAT2B,SUZ12,RPS6KA5,TNF,HIF1A,ATXN1,PRMT5,ESR1,MYCN,RNF4,NR4A2,SMAD4,TLR2,IL6,	1.13E-2
GO:0001817	regulation of cytokine production	HIF1A,TNF,SMAD4,TLR2,IL6,	1.17E-2
GO:0045893	positive regulation of transcription, DNA-dependent	RNF4,NR4A2,HIF1A,TNF,ATXN1,SMAD4,IL6,	1.26E-2
GO:0051254	positive regulation of RNA metabolic process	RNF4,NR4A2,HIF1A,TNF,ATXN1,SMAD4,IL6,	1.32E-2
GO:0031401	positive regulation of protein modification process	CCND1,BMPR2,TNF,SMAD4,IL6,	1.32E-2
GO:0010647	positive regulation of cell communication	ERBB4,HIF1A,TNF,SMAD4,ESR1,IL6,	1.47E-2
GO:0001819	positive regulation of cytokine production	HIF1A,TNF,TLR2,IL6,	1.59E-2
GO:0031328	positive regulation of cellular biosynthetic process	RNF4,ABCA1,NR4A2,HIF1A,TNF,ATXN1,SMAD4,IL6,	1.60E-2
GO:0009891	positive regulation of biosynthetic process	RNF4,ABCA1,NR4A2,HIF1A,TNF,ATXN1,SMAD4,IL6,	1.74E-2
GO:0030324	lung development	BMPR2,HOXA5,MYCN,TGFBR2,	2.09E-2
GO:0030323	respiratory tube development	BMPR2,HOXA5,MYCN,TGFBR2,	2.28E-2
GO:0009991	response to extracellular stimulus	CCND1,BMPR2,PTEN,NR4A2,PTENP1,TGFBR2,	2.39E-2
GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	ERBB4,BMPR2,PTEN,PIK3R3,RPS6KA5,PTENP1,	2.56E-2
GO:0060541	respiratory system development	BMPR2,HOXA5,MYCN,TGFBR2,	2.68E-2
GO:0045597	positive regulation of cell differentiation	BMPR2,HIF1A,SMAD4,TGFBR2,IL6,	2.77E-2
GO:0048661	positive regulation of smooth muscle cell proliferation	TNF,TGFBR2,IL6,	2.88E-2
GO:0032270	positive regulation of cellular protein metabolic process	CCND1,BMPR2,TNF,SMAD4,IL6,	2.95E-2
GO:0045941	positive regulation of transcription	RNF4,NR4A2,HIF1A,TNF,ATXN1,SMAD4,IL6,	2.95E-2
GO:0016192	vesicle-mediated transport	RAB13,NPEPL1,VPS4B,ABCA1,KDELR2,TGFBR2,RAB14,	3.28E-2
GO:0051247	positive regulation of protein metabolic process	CCND1,BMPR2,TNF,SMAD4,IL6,	3.43E-2
GO:0044093	positive regulation of molecular function	CCND1,NR4A2,HIF1A,TNF,TGFBR2,TLR2,IL6,	3.57E-2
GO:0016570	histone modification	RPS6KA5,SUZ12,KAT2B,PRMT5,	3.79E-2
GO:0007242	intracellular signaling cascade	CCND1,RAB13,RNF4,RPS6KA5,ABCA1,TNF,SOCS1,TLR2,ESR1,RAB14,	3.81E-2
GO:0032675	regulation of interleukin-6 production	TNF,TLR2,IL6,	3.87E-2
GO:0042981	regulation of apoptosis	PTEN,NR4A2,TNF,PTENP1,CUL5,TLR2,ESR1,BCL2L11,IL6,	3.97E-2
GO:0016569	covalent chromatin modification	RPS6KA5,SUZ12,KAT2B,PRMT5,	4.15E-2
GO:0043067	regulation of programmed cell death	PTEN,NR4A2,TNF,PTENP1,CUL5,TLR2,ESR1,BCL2L11,IL6,	4.19E-2
GO:0010941	regulation of cell death	PTEN,NR4A2,TNF,PTENP1,CUL5,TLR2,ESR1,BCL2L11,IL6,	4.28E-2
GO:0051092	positive regulation of NF-kappaB transcription factor activity	TNF,TLR2,IL6,	5.00E-2
GO:0032880	regulation of protein localization	TNF,SMAD4,IL6,RAB14,	5.35E-2
GO:0016477	cell migration	PTEN,NR4A2,HIF1A,TNF,PTENP1,IL6,	5.39E-2
GO:0010557	positive regulation of macromolecule biosynthetic process	RNF4,NR4A2,HIF1A,TNF,ATXN1,SMAD4,IL6,	6.10E-2
GO:0001775	cell activation	TNF,TGFBR2,TLR2,IL6,IMPDH1,	6.19E-2
GO:0046907	intracellular transport	NPEPL1,VPS4B,ABCA1,KDELR2,TNF,ATXN1,RAB14,	6.23E-2
GO:0048660	regulation of smooth muscle cell proliferation	TNF,TGFBR2,IL6,	6.26E-2
GO:0006468	protein amino acid phosphorylation	ERBB4,CCND1,BMPR2,RPS6KA5,TNF,TGFBR2,GRK6,	6.70E-2
GO:0009967	positive regulation of signal transduction	HIF1A,TNF,SMAD4,ESR1,IL6,	6.81E-2
GO:0032268	regulation of cellular protein metabolic process	CCND1,BMPR2,TNF,SMAD4,SOCS1,IL6,	7.04E-2
GO:0051098	regulation of binding	TNF,SMAD4,TLR2,IL6,	7.12E-2
GO:0010876	lipid localization	VPS4B,ABCA1,TNF,PSAP,	7.64E-2
GO:0051674	localization of cell	PTEN,NR4A2,HIF1A,TNF,PTENP1,IL6,	7.82E-2
GO:0048870	cell motility	PTEN,NR4A2,HIF1A,TNF,PTENP1,IL6,	7.82E-2
GO:0051241	negative regulation of multicellular organismal process	BMPR2,TNF,TGFBR2,IL6,	8.61E-2
GO:0006917	induction of apoptosis	PTEN,TNF,PTENP1,CUL5,TLR2,BCL2L11,	9.02E-2
GO:0012502	induction of programmed cell death	PTEN,TNF,PTENP1,CUL5,TLR2,BCL2L11,	9.12E-2
GO:0030334	regulation of cell migration	ERBB4,PTEN,HIF1A,PTENP1,IL6,	9.35E-2
GO:0016197	endosome transport	VPS4B,ABCA1,RAB14,	9.81E-2

KEGG pathways and Gene Ontology terms enriched for the interacted genes of ncRNA from RAID and miRTarBase.

disease name	related genes	p-value